Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2034

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2033: 10401 - K09595 HM13 minor histocompatibility antigen H13, at 796887 to 798543 10401 mRNA_2034: 10402 - HMMPfam-Spherulation-specific family 4-PF12138, at 799369 to 800999 10402 mRNA_2035: 10403 - K14824 ERB1, BOP1 ribosome biogenesis protein ERB1, at 801171 to 804014 10403

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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798,432 + 0.4
798,557 + -0.3
798,558 - -1.5
798,570 - 1.3
798,581 - 0.7
798,683 - -0.5
798,723 + 2.1
798,898 + 0.7
798,929 - 0.9
799,017 + 0.8
799,042 + -0.3
799,180 - 0.4
799,195 + 2.9
799,247 + 1.4
799,274 + 0.7
799,339 + 0.0
799,461 + 0.8
799,493 + 1.0
799,522 - 0.1
799,904 + 10402 mRNA_2034 0.33 1.9
799,924 - 10402 mRNA_2034 0.34 -0.1
800,003 + 10402 mRNA_2034 0.39 1.6
800,700 + 10402 mRNA_2034 0.82 -1.0
800,989 - 1.3