Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2012

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2011: 10379 - KOG2533 Permease of the major facilitator superfamily, at 737348 to 740033 10379 mRNA_2012: 10380 - K00681 ggt gamma-glutamyltranspeptidase / glutathione hydrolase, at 740635 to 742993 10380 mRNA_2013: 10381 - SUPERFAMILY--SSF49899, at 743258 to 744708 10381

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
739,685 + 10379 mRNA_2011 0.87 0.2
739,920 + 0.7
739,924 - -0.5
739,978 - 0.2
740,260 - -0.8
740,261 + -2.2
740,280 - -0.2
740,430 - 1.5
740,433 + 0.3
740,439 - -0.8
740,439 + 2.2
740,443 + -0.6
740,449 + -0.2
740,449 + 1.8
740,454 + 1.0
740,459 + -1.3
740,498 - 1.0
740,504 + 0.1
740,533 + 2.7
740,540 + -1.8
740,558 + 0.1
740,559 + -0.2
740,566 - 1.1
740,569 - 0.6
740,570 - 1.4
740,570 - 1.4
740,571 + -1.4
740,582 + -0.4
740,582 + 0.7
740,612 + 0.6
740,665 + -0.0
740,730 - 0.1
741,012 + 10380 mRNA_2012 0.16 -0.4
741,304 - 10380 mRNA_2012 0.28 0.2
741,309 + 10380 mRNA_2012 0.29 0.6
741,405 - 10380 mRNA_2012 0.33 1.3
741,480 + 10380 mRNA_2012 0.36 -0.8
741,754 + 10380 mRNA_2012 0.47 0.2
741,786 + 10380 mRNA_2012 0.49 0.6
741,900 + 10380 mRNA_2012 0.54 0.6
742,077 - 10380 mRNA_2012 0.61 -1.0
742,310 + 10380 mRNA_2012 0.71 1.9
742,610 + 10380 mRNA_2012 0.84 0.0
742,852 - -2.4
742,960 + 0.2
743,120 + 1.7
743,382 - 1.2
743,503 - 10381 mRNA_2013 0.17 0.1