Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1995

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1994: 10362 - K03235 EF3, TEF3 elongation factor 3, at 695063 to 698759 10362 mRNA_1995: 10363 - KOG0062 ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b, at 699690 to 700377 10363 mRNA_1996: 10364 - KOG0379 Kelch repeat-containing proteins, at 700597 to 701909 10364

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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698,822 + -0.9
699,410 - 0.7
699,418 + 1.0
699,707 + -2.4
699,843 - 10363 mRNA_1995 0.22 0.1
699,942 - 10363 mRNA_1995 0.37 0.1
700,004 + 10363 mRNA_1995 0.46 0.9
700,441 + 0.1
700,476 + 1.6
700,538 + 0.7
700,745 - 10364 mRNA_1996 0.11 -0.4
701,029 - 10364 mRNA_1996 0.33 0.1
701,042 - 10364 mRNA_1996 0.34 -0.5
701,185 + 10364 mRNA_1996 0.45 -0.5