Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1976

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1975: 10343 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 651585 to 654888 10343 mRNA_1976: 10344 - Hypothetical Protein, at 655294 to 656131 10344 mRNA_1977: 10345 - HMMPfam-Eukaryotic initiation factor 4E-PF01652,SUPERFAMILY--SSF55418, at 656305 to 657635 10345

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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654,309 + 10343 mRNA_1975 0.82 0.9
654,315 - 10343 mRNA_1975 0.83 1.0
654,348 - 10343 mRNA_1975 0.84 -1.2
654,624 - 0.1
654,656 - 1.2
654,920 + 2.5
655,205 + 3.0
655,376 - -0.2
655,501 - 10344 mRNA_1976 0.25 -0.7