Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1969

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1968: 10336 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 633859 to 635339 10336 mRNA_1969: 10337 - K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1, at 635638 to 637721 10337 mRNA_1970: 10338 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 638087 to 640268 10338

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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634,825 - 10336 mRNA_1968 0.65 1.3
635,258 - 1.1
635,420 + 0.0
635,511 - 0.5
635,532 - 0.1
635,546 - -0.9
635,559 + 1.3
635,705 + 2.5
635,848 - 10337 mRNA_1969 0.10 -0.3
636,142 - 10337 mRNA_1969 0.24 1.4
637,606 - 1.0
637,873 - 1.7
637,896 - -2.0
637,905 - 0.2
638,024 - 1.1
638,144 - 1.0
638,189 + 1.1
638,460 + 10338 mRNA_1970 0.17 -0.6
638,461 + 10338 mRNA_1970 0.17 1.0
638,658 + 10338 mRNA_1970 0.26 2.0