Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1955

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1954: 10322 - Hypothetical Protein, at 601425 to 602462 10322 mRNA_1955: 10323 - KOG0379 Kelch repeat-containing proteins, at 603461 to 605817 10323

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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602,471 - 2.1
602,512 + 0.0
603,050 + 0.1
603,052 - -0.3
603,345 - 0.4
603,362 - 0.1
603,385 + 0.2
603,496 - 0.8
604,343 + 10323 mRNA_1955 0.37 1.4
604,645 + 10323 mRNA_1955 0.50 -0.3
604,656 + 10323 mRNA_1955 0.51 0.3
604,680 + 10323 mRNA_1955 0.52 1.7
604,770 + 10323 mRNA_1955 0.56 0.3
604,785 + 10323 mRNA_1955 0.56 -1.7
605,004 - 10323 mRNA_1955 0.65 0.5
605,235 - 10323 mRNA_1955 0.75 3.0
605,941 - 0.6
606,122 + -1.0
606,243 - 0.7
606,372 + -0.8
606,388 - 0.7
606,407 + 0.4
606,410 + 0.4
606,541 + 0.3
606,542 + 0.9
606,542 - 0.2
606,551 - 0.0
606,594 + 1.3
606,680 - 1.4
606,704 - 0.4
606,710 + 1.3