Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1932

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1931: 10299 - KOG2112 Lysophospholipase, at 542776 to 544439 10299 mRNA_1932: 10300 - BLAST family 69 glycosyltransferase [Melampsora larici-..., at 544727 to 545015 10300 mRNA_1933: 10301 - Hypothetical Protein, at 545451 to 545690 10301

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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543,737 - 10299 mRNA_1931 0.58 -1.1
543,756 - 10299 mRNA_1931 0.59 0.4
544,055 - 10299 mRNA_1931 0.77 -0.5
544,203 + 10299 mRNA_1931 0.86 0.7
544,346 - 1.8
544,363 - -2.4
544,483 + 0.1
544,489 + -1.1
544,505 + -1.3
544,509 + 0.4
544,630 + -0.8
544,667 - -1.4
544,770 + 10300 mRNA_1932 0.15 1.8
544,900 - 10300 mRNA_1932 0.60 2.4
544,943 + 10300 mRNA_1932 0.75 2.7
545,378 + 0.5
545,507 - 10301 mRNA_1933 0.23 0.2
545,522 + 10301 mRNA_1933 0.30 0.2
545,531 + 10301 mRNA_1933 0.33 -0.7
545,539 + 10301 mRNA_1933 0.37 2.4
545,627 + 10301 mRNA_1933 0.73 0.3
545,632 + 10301 mRNA_1933 0.75 0.3
545,656 - 10301 mRNA_1933 0.85 -0.4
545,677 + 0.2
545,678 + 1.2
545,789 - 0.4
545,801 - -0.1
545,804 - -0.5
545,808 + -0.7
545,808 + 0.4
545,815 - 0.5
545,818 + -0.3
545,819 + 1.0
545,843 + -0.6
545,845 + 0.4
545,846 + 0.8
545,869 - 2.3
545,932 + -0.7
545,965 - -0.0
545,983 + -0.5
545,986 - -0.8
546,008 - 1.7