Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1931

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1931: 10299 - KOG2112 Lysophospholipase, at 542776 to 544439 10299 mRNA_1932: 10300 - BLAST family 69 glycosyltransferase [Melampsora larici-..., at 544727 to 545015 10300

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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541,787 + 0.4
541,804 + 2.3
541,875 + 0.8
541,910 + 0.5
541,911 - -1.6
541,912 + -0.6
541,933 + 0.4
541,964 - -0.2
541,976 + 0.0
541,987 + -1.9
542,008 + -1.1
542,070 - -0.0
542,094 - -0.4
542,105 + 0.8
542,110 - -0.5
542,111 - -1.4
542,115 + -0.6
542,132 + 0.2
542,147 - -1.3
542,148 + 0.4
542,151 - 1.0
542,227 + 0.7
542,242 - -0.5
542,249 - 0.4
542,252 - 2.5
542,261 - 0.4
542,273 + -0.4
542,295 + -0.6
542,297 + 0.0
542,324 - -0.5
542,372 + 0.3
542,375 - 1.5
542,377 + 3.0
542,384 + -0.5
542,399 - 0.3
542,403 - 0.4
542,404 + 0.1
542,407 + 3.5
542,407 - 1.0
542,408 + 0.4
542,409 + 0.2
542,410 - -0.1
542,411 - 1.9
542,414 + -0.5
542,417 - -0.1
542,417 - 0.5
542,421 + 1.2
542,424 - 0.3
542,424 - -0.3
542,426 - 0.2
542,428 - 0.1
542,428 + -0.4
542,431 + 0.7
542,446 + -0.3
542,451 + -0.3
542,452 - 0.4
542,452 - 2.2
542,454 - 1.7
542,467 - 1.8
542,470 + 0.8
542,478 - 0.7
542,484 - 1.4
542,485 - -0.1
542,485 - -0.7
542,485 - -0.3
542,497 + 0.0
542,501 - 0.5
542,506 - -0.1
542,515 + 0.7
542,520 + -0.1
542,521 + 0.6
542,522 + 1.0
542,527 - 1.5
542,530 + 0.0
542,533 + -0.5
542,538 + 0.9
542,547 - 0.7
542,548 - 2.0
542,568 + 0.3
542,582 + 0.2
542,620 - -0.1
542,631 - 1.7
542,632 + -1.6
542,642 + 0.7
542,647 - -0.4
542,647 - 0.0
542,653 - -0.5
542,654 + 1.6
542,658 - 1.9
542,662 - 0.3
542,662 - -1.8
542,663 + 1.0
542,671 - 0.4
542,672 - 0.6
542,672 - 1.5
542,672 - 0.5
542,679 - -0.2
542,680 + 1.2
542,682 + 0.1
542,686 - 0.0
542,687 - -0.2
542,688 + 0.9
542,689 + 1.4
542,692 + 1.9
542,693 + -0.4
542,703 - -1.4
542,704 + 0.7
542,705 - 2.6
542,707 + 0.0
542,708 - 2.7
542,710 - 2.6
542,731 + -0.5
542,739 - 0.2
542,742 + 2.0
542,782 + 1.1
542,822 + -0.3
542,851 + -0.3
542,863 - -2.8
542,989 - 10299 mRNA_1931 0.13 1.4
542,989 + 10299 mRNA_1931 0.13 1.8
543,026 + 10299 mRNA_1931 0.15 -1.5
543,133 - 10299 mRNA_1931 0.21 1.9
543,135 + 10299 mRNA_1931 0.22 -1.4
543,136 + 10299 mRNA_1931 0.22 -0.1
543,143 - 10299 mRNA_1931 0.22 0.0
543,143 - 10299 mRNA_1931 0.22 0.1
543,153 + 10299 mRNA_1931 0.23 -0.1
543,154 - 10299 mRNA_1931 0.23 1.3
543,165 - 10299 mRNA_1931 0.23 1.2
543,174 + 10299 mRNA_1931 0.24 1.1
543,234 + 10299 mRNA_1931 0.28 -0.0
543,253 + 10299 mRNA_1931 0.29 -0.2
543,268 - 10299 mRNA_1931 0.30 0.7
543,273 + 10299 mRNA_1931 0.30 0.2
543,286 - 10299 mRNA_1931 0.31 -0.0
543,293 - 10299 mRNA_1931 0.31 1.2
543,294 + 10299 mRNA_1931 0.31 2.5
543,297 + 10299 mRNA_1931 0.31 2.4
543,298 - 10299 mRNA_1931 0.31 0.0
543,303 + 10299 mRNA_1931 0.32 1.4
543,307 + 10299 mRNA_1931 0.32 -0.2
543,307 - 10299 mRNA_1931 0.32 -0.4
543,310 + 10299 mRNA_1931 0.32 1.3
543,314 + 10299 mRNA_1931 0.32 -0.2
543,315 - 10299 mRNA_1931 0.32 1.5
543,323 - 10299 mRNA_1931 0.33 -0.3
543,323 - 10299 mRNA_1931 0.33 0.8
543,324 + 10299 mRNA_1931 0.33 1.5
543,324 + 10299 mRNA_1931 0.33 -1.8
543,328 + 10299 mRNA_1931 0.33 0.4
543,331 + 10299 mRNA_1931 0.33 1.4
543,332 + 10299 mRNA_1931 0.33 -0.5
543,372 - 10299 mRNA_1931 0.36 -1.7
543,382 - 10299 mRNA_1931 0.36 2.6
543,388 + 10299 mRNA_1931 0.37 -3.2
543,389 + 10299 mRNA_1931 0.37 -1.1
543,432 + 10299 mRNA_1931 0.39 -0.1
543,447 - 10299 mRNA_1931 0.40 0.9
543,454 - 10299 mRNA_1931 0.41 0.4
543,459 - 10299 mRNA_1931 0.41 0.9
543,460 - 10299 mRNA_1931 0.41 -1.0
543,485 - 10299 mRNA_1931 0.43 0.3
543,493 - 10299 mRNA_1931 0.43 0.7
543,506 - 10299 mRNA_1931 0.44 0.4
543,527 - 10299 mRNA_1931 0.45 3.7
543,613 + 10299 mRNA_1931 0.50 0.9
543,616 - 10299 mRNA_1931 0.50 0.5
543,737 - 10299 mRNA_1931 0.58 -1.1
543,756 - 10299 mRNA_1931 0.59 0.4
544,055 - 10299 mRNA_1931 0.77 -0.5
544,203 + 10299 mRNA_1931 0.86 0.7
544,346 - 1.8
544,363 - -2.4
544,483 + 0.1
544,489 + -1.1
544,505 + -1.3
544,509 + 0.4
544,630 + -0.8
544,667 - -1.4
544,770 + 10300 mRNA_1932 0.15 1.8
544,900 - 10300 mRNA_1932 0.60 2.4
544,943 + 10300 mRNA_1932 0.75 2.7
545,378 + 0.5