Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1921

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1920: 10288 - Hypothetical Protein, at 515602 to 517203 10288 mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517842 to 518810 10289 mRNA_1922: 10290 - Hypothetical Protein, at 518847 to 519239 10290 mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519459 to 521071 10291

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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517,127 + 3.1
517,400 + 0.1
517,416 + -1.4
517,456 + -0.4
517,484 + 0.0
517,496 + 0.5
517,509 + 1.9
517,511 + 0.1
517,520 - 0.2
517,526 - -0.9
517,533 - -0.6
517,540 - 0.7
517,541 - -0.4
517,553 - 0.1
517,606 - 0.3
517,738 + -0.1
518,026 + 10289 mRNA_1921 0.19 1.5
518,611 - 10289 mRNA_1921 0.79 2.3
518,615 - 10289 mRNA_1921 0.80 0.4
518,936 - 10290 mRNA_1922 0.23 1.5
519,163 - 10290 mRNA_1922 0.80 2.4
519,377 - 0.5
519,674 + 10291 mRNA_1923 0.13 -1.5