Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1891

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1890: 10258 - Hypothetical Protein, at 442391 to 442819 10258 mRNA_1891: 10259 - K03083 GSK3B glycogen synthase kinase 3 beta, at 443414 to 444929 10259 mRNA_1892: 10260 - K15743 CES3_5 carboxylesterase 3/5, at 445526 to 447987 10260

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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442,427 - -0.7
442,431 - 1.4
442,444 - 10258 mRNA_1890 0.12 -0.7
442,460 - 10258 mRNA_1890 0.16 0.5
442,466 + 10258 mRNA_1890 0.17 -0.1
442,553 + 10258 mRNA_1890 0.38 0.5
442,605 - 10258 mRNA_1890 0.50 1.2
442,623 + 10258 mRNA_1890 0.54 0.9
442,763 + 10258 mRNA_1890 0.87 0.8
442,919 - 0.4
442,927 + -1.4
442,927 + -0.9
442,946 + 1.7
442,947 + 0.1
443,113 + 1.1
443,225 - -0.4
443,849 - 10259 mRNA_1891 0.29 -0.8
444,256 - 10259 mRNA_1891 0.56 0.7
444,457 - 10259 mRNA_1891 0.69 3.9
444,573 + 10259 mRNA_1891 0.76 0.7
444,907 - -0.8
445,177 - 0.7
445,187 + 2.1
445,399 - -0.0
445,455 + -3.0