Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1876

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1875: 10243 - Hypothetical Protein, at 415484 to 416261 10243 mRNA_1876: 10244 - Hypothetical Protein, at 416392 to 418180 10244 mRNA_1877: 10245 - K03363 CDC20 cell division cycle 20, cofactor of APC complex, at 418587 to 420557 10245

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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415,721 + 10243 mRNA_1875 0.30 1.7
416,426 + 1.5
417,449 + 10244 mRNA_1876 0.59 -0.8
417,888 + 10244 mRNA_1876 0.84 -0.3
418,023 - -0.3
418,145 - -0.2
418,151 - 1.1
418,184 + 0.6
418,204 + 0.0
418,210 + 0.1
418,330 + 0.3
418,345 - 0.2
418,351 - 0.8
418,357 + 1.9
418,365 + -0.0
418,365 - -0.3
418,365 + -0.1
418,367 - 0.8
418,368 + 1.0
418,370 + -1.4
418,371 + 0.3
418,372 + 0.7
418,382 + -0.9
418,383 + 0.4
418,397 - 0.8
418,400 - 0.6
418,401 + 1.1
418,403 + 1.1
418,408 - 1.1
418,412 + 2.0
418,418 - 0.8
418,426 + 2.4
418,427 - 0.5
418,482 + 2.3
418,485 - 0.1
418,492 - 0.4
418,492 + -0.1
418,494 - 0.5
418,495 + -1.4
418,496 + 1.2
418,503 + 0.2
418,504 + -0.1
418,510 + -0.0
418,527 - 0.8