Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1835

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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323,983 - 10202 mRNA_1834 0.76 1.6
324,373 - -0.6
324,383 - 0.7
324,813 + 0.5
325,115 - 10203 mRNA_1835 0.16 2.0
325,846 - 10203 mRNA_1835 0.42 0.8
326,323 - 10203 mRNA_1835 0.59 -0.6
326,473 + 10203 mRNA_1835 0.64 1.5
326,608 + 10203 mRNA_1835 0.69 -1.6
326,877 + 10203 mRNA_1835 0.78 -0.3
326,913 + 10203 mRNA_1835 0.79 0.7
327,059 + 10203 mRNA_1835 0.84 0.8
327,335 - 1.4
327,347 + -0.3
327,356 + -0.5
327,358 + -2.0
327,611 + 2.0
327,629 + 0.6
327,650 - 1.5
327,651 + 0.1
327,782 - -0.4
327,813 + 1.1
327,817 + 0.6
328,027 - 2.2
328,122 + -0.9
328,228 - -0.7
328,263 + 1.2