Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1834

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1833: 10201 - Hypothetical Protein, at 322426 to 322877 10201 mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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322,153 - 0.8
322,181 + -0.0
322,184 + 1.8
322,191 + -0.6
322,194 + 0.7
322,194 + 1.3
322,224 + 0.7
322,235 - 1.4
322,329 - 0.2
322,334 + -0.5
322,481 - 10201 mRNA_1833 0.12 -1.4
322,884 + -0.7
322,904 + 0.9
323,235 + 10202 mRNA_1834 0.15 -0.8
323,273 + 10202 mRNA_1834 0.18 0.6
323,354 - 10202 mRNA_1834 0.25 0.5
323,369 - 10202 mRNA_1834 0.26 -0.0
323,983 - 10202 mRNA_1834 0.76 1.6
324,373 - -0.6
324,383 - 0.7
324,813 + 0.5
325,115 - 10203 mRNA_1835 0.16 2.0