Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1823

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1823: 10191 - KOG3783 Uncharacterized conserved protein, at 298528 to 301287 10191 mRNA_1824: 10192 - Hypothetical Protein, at 301582 to 303988 10192

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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297,541 - 0.5
297,551 - -1.1
297,554 + -0.5
297,559 + 1.3
297,610 - 1.1
297,618 - -1.3
297,637 - -1.0
297,642 - 0.7
297,645 + 1.0
297,817 + 0.7
297,961 - 0.6
298,075 - -0.7
298,095 - 0.0
298,112 - 2.1
298,257 + -0.1
298,430 + -0.5
298,598 - 1.2
298,772 - 1.0
298,853 + 10191 mRNA_1823 0.12 0.0
299,069 + 10191 mRNA_1823 0.20 0.7
299,138 + 10191 mRNA_1823 0.22 0.3
299,727 - 10191 mRNA_1823 0.43 0.3
300,005 + 10191 mRNA_1823 0.54 2.8
300,183 - 10191 mRNA_1823 0.60 0.2
300,406 + 10191 mRNA_1823 0.68 0.6
300,864 + 10191 mRNA_1823 0.85 -1.1
300,926 - 10191 mRNA_1823 0.87 -1.1
301,161 + 1.4
301,201 + -2.2
301,314 + 1.1
301,325 - 0.6
301,336 - -0.2
301,475 - -0.1
301,485 + 2.5
301,503 - 0.2
301,504 - -0.2
301,505 + 2.0
301,510 - -1.5
301,608 - 1.7
301,649 - -0.6
301,665 + 1.2
301,682 + 0.7