Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1743

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94671 to 96223 10110 mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96619 to 100637 10111 mRNA_1744: 10112 - Hypothetical Protein, at 100843 to 102379 10112

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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95,641 + 10110 mRNA_1742 0.62 1.1
96,365 - 0.1
96,385 + 0.2
96,402 - 1.2
96,545 - 2.6
96,548 + 1.5
96,870 - 1.5
97,029 + 10111 mRNA_1743 0.10 -0.8
97,152 - 10111 mRNA_1743 0.13 1.1
97,896 - 10111 mRNA_1743 0.32 -0.3
97,953 - 10111 mRNA_1743 0.33 0.1
98,050 - 10111 mRNA_1743 0.36 -1.8
98,586 + 10111 mRNA_1743 0.49 -1.8
98,616 - 10111 mRNA_1743 0.50 2.7
98,640 + 10111 mRNA_1743 0.50 0.9
99,211 + 10111 mRNA_1743 0.64 0.2
99,219 - 10111 mRNA_1743 0.65 0.2
99,658 - 10111 mRNA_1743 0.76 0.5
99,713 + 10111 mRNA_1743 0.77 0.7
99,937 - 10111 mRNA_1743 0.83 0.8
100,106 + 10111 mRNA_1743 0.87 -0.5
100,213 + 10111 mRNA_1743 0.89 -1.5
100,373 - -0.5
100,381 - -1.2
100,519 - 1.0
100,630 - -0.3
100,656 + -0.1
100,668 + 1.5
100,696 + 1.0
100,748 + 1.8
100,819 - 0.6
101,177 - 10112 mRNA_1744 0.22 0.8
101,182 + 10112 mRNA_1744 0.22 -1.2