Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1742

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1742: 10110 - SUPERFAMILY--SSF48097, at 94671 to 96223 10110 mRNA_1743: 10111 - HMMPfam-Protein of unknown function DUF262-PF03235, at 96619 to 100637 10111

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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93,680 - 1.4
93,680 - 2.3
93,681 - 1.1
93,684 - -0.2
93,684 - 0.1
93,687 + -1.6
93,692 + 0.1
93,710 + 1.2
93,725 - 0.4
93,735 - -0.5
93,739 - -0.4
93,747 - 0.4
93,776 - 2.3
93,810 + -0.0
93,811 + 2.8
93,844 - 0.7
93,861 + -0.2
93,865 + 1.1
93,884 + 1.3
93,885 - 1.2
93,887 - -0.4
93,887 - 1.2
93,888 - 0.2
93,890 + 1.0
93,890 + -0.6
93,896 + 0.5
93,901 + -1.2
93,902 - 1.3
93,923 + 0.3
93,937 - -2.5
94,030 - -0.2
94,030 + 0.2
94,035 + -0.0
94,038 + -0.1
94,044 - 0.1
94,055 + 2.1
94,056 - 2.7
94,062 + 0.0
94,065 - 2.4
94,097 + 0.1
94,100 + 0.0
94,100 + 1.0
94,106 + -0.8
94,137 + 1.1
94,141 + 0.1
94,144 - 0.3
94,150 + -0.1
94,150 + 0.5
94,156 + -1.9
94,156 + 2.2
94,165 + -1.7
94,171 - 0.2
94,197 - -0.2
94,214 - 0.2
94,223 - 1.1
94,224 + -0.1
94,243 - -1.0
94,256 - -1.1
94,262 + 0.4
94,266 - -0.3
94,278 + -0.2
94,281 - 1.2
94,282 + 1.4
94,289 - 1.0
94,294 + 0.3
94,296 + -1.6
94,296 + 0.3
94,300 + 1.8
94,333 - 2.7
94,383 + -0.4
94,390 - 0.1
94,397 + -0.5
94,413 - 2.1
94,415 - 0.0
94,421 + -0.3
94,423 - 2.9
94,428 + 1.3
94,440 + -0.5
94,442 - 1.1
94,443 + -1.6
94,444 - 0.9
94,444 + -0.1
94,468 - 0.3
94,470 - -0.2
94,538 - -1.1
94,547 + 2.8
94,584 - -1.0
94,590 - 0.6
94,591 + 1.5
94,593 + -0.7
94,611 + -2.0
94,700 - 0.3
94,714 - -0.1
94,718 + 1.0
94,726 + 1.5
94,734 - -1.0
94,752 - 1.4
94,753 + -0.3
94,884 - 10110 mRNA_1742 0.14 1.1
95,096 + 10110 mRNA_1742 0.27 1.1
95,508 + 10110 mRNA_1742 0.54 0.6
95,615 - 10110 mRNA_1742 0.61 1.3
95,641 + 10110 mRNA_1742 0.62 1.1
96,365 - 0.1
96,385 + 0.2
96,402 - 1.2
96,545 - 2.6
96,548 + 1.5
96,870 - 1.5
97,029 + 10111 mRNA_1743 0.10 -0.8
97,152 - 10111 mRNA_1743 0.13 1.1