Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1740

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1739: 10107 - Hypothetical Protein, at 84456 to 87207 10107 mRNA_1740: 10108 - K20828 ZNF143_76, STAF zinc finger protein 143/76, at 87517 to 89814 10108

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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87,152 - 1.0
87,316 + -0.4
87,317 - 0.4
87,511 - 1.5
87,749 + 10108 mRNA_1740 0.10 1.6
87,874 + 10108 mRNA_1740 0.16 0.0
87,918 + 10108 mRNA_1740 0.17 -0.3
87,935 + 10108 mRNA_1740 0.18 -0.1
88,035 + 10108 mRNA_1740 0.23 0.4
88,201 - 10108 mRNA_1740 0.30 0.7
88,489 + 10108 mRNA_1740 0.42 0.9
88,513 + 10108 mRNA_1740 0.43 0.4
88,775 - 10108 mRNA_1740 0.55 0.8
88,796 + 10108 mRNA_1740 0.56 1.4
89,390 - 10108 mRNA_1740 0.82 -1.3
89,477 + 10108 mRNA_1740 0.85 1.1
89,778 - -1.6
89,930 - 1.1
90,072 - 0.3
90,079 + 0.8
90,237 - -0.1
90,375 + -1.6
90,397 - 3.4
90,431 + 0.8
90,485 - -1.2
90,521 - 0.4
90,526 - -0.3
90,536 + -1.1
90,541 + -1.6
90,661 - 0.4
90,663 + -1.0
90,677 - -1.0
90,680 - 0.7
90,681 - 0.2