Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1732

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1731: 10099 - Hypothetical Protein, at 62090 to 63277 10099 mRNA_1732: 10100 - Hypothetical Protein, at 63566 to 64770 10100 mRNA_1733: 10101 - KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1, at 65153 to 66958 10101

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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62,766 + 10099 mRNA_1731 0.57 1.5
62,808 - 10099 mRNA_1731 0.60 -0.3
62,946 - 10099 mRNA_1731 0.72 -0.3
63,340 - 0.1
63,378 + 2.1
63,394 + 0.3
63,397 - -0.2
63,683 + -0.5
63,707 + 10100 mRNA_1732 0.12 1.0
63,954 - 10100 mRNA_1732 0.32 2.4
64,217 + 10100 mRNA_1732 0.54 0.0
64,217 + 10100 mRNA_1732 0.54 1.0
64,240 - 10100 mRNA_1732 0.56 0.4
64,534 + 10100 mRNA_1732 0.80 -0.4
64,623 + 10100 mRNA_1732 0.88 1.4
64,678 - 0.4
64,684 - 1.5
64,984 - 0.0
65,387 - 10101 mRNA_1733 0.13 1.4
65,397 + 10101 mRNA_1733 0.14 0.7
65,588 - 10101 mRNA_1733 0.24 1.9
65,608 + 10101 mRNA_1733 0.25 1.8
65,620 + 10101 mRNA_1733 0.26 -2.0