Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1684

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1683: 10051 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 882700 to 883622 10051 mRNA_1684: 10052 - Hypothetical Protein, at 883850 to 884776 10052 mRNA_1685: 10053 - Hypothetical Protein, at 885302 to 886420 10053

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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883,171 - 10051 mRNA_1683 0.51 0.3
883,189 - 10051 mRNA_1683 0.53 0.7
883,788 - 0.1
883,818 + 0.1
883,935 - -0.2
883,956 + 10052 mRNA_1684 0.11 -0.2
884,091 - 10052 mRNA_1684 0.26 -0.8
884,726 + -0.4
884,807 - -1.9
884,824 - 0.2
884,842 - -0.0
884,869 - -0.5
884,876 + 1.5
884,921 + -0.4
884,926 + 0.6
884,933 + -0.0
884,944 - 0.0
884,954 + 1.3
884,978 - 0.4
885,024 - -0.8
885,033 + 0.1
885,178 + -0.2
885,310 + -0.6