Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1674

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1674: 10042 - K07297 ADIPOR adiponectin receptor, at 860201 to 862501 10042 mRNA_1675: 10043 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 863051 to 864755 10043

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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859,279 - 0.3
859,285 + -0.9
859,330 + -0.6
859,391 - 1.7
859,430 - 0.4
859,430 - 0.1
859,539 + 0.8
859,578 + 1.4
859,685 + 0.8
859,769 - 2.3
859,796 + 1.8
859,952 - -1.5
859,959 - 0.9
859,960 + -0.4
859,971 - 0.4
859,979 + 0.2
860,095 + 0.4
860,104 + -0.9
860,129 + 0.1
860,258 + 0.4
860,266 + 0.0
860,266 + 1.7
860,268 - 1.9
860,278 - 1.5
860,724 + 10042 mRNA_1674 0.23 1.3
861,142 + 10042 mRNA_1674 0.41 -0.1
861,243 + 10042 mRNA_1674 0.45 0.8
861,301 + 10042 mRNA_1674 0.48 0.7
861,457 + 10042 mRNA_1674 0.55 0.1
861,592 - 10042 mRNA_1674 0.60 0.6
861,726 - 10042 mRNA_1674 0.66 0.1
861,866 - 10042 mRNA_1674 0.72 2.1
862,207 - 10042 mRNA_1674 0.87 -0.4
862,338 + -1.4
862,472 + -0.9
862,603 + -0.9
862,633 + -0.1
862,669 - -0.9
862,773 + 0.7
862,794 + 0.1
862,821 - -2.1
863,083 - 0.9
863,360 - 10043 mRNA_1675 0.18 0.2
863,467 - 10043 mRNA_1675 0.24 2.5
863,480 + 10043 mRNA_1675 0.25 1.7