Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1483

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1482: 9850 - BLAST zn -c6 transcription factor [Malassezia pachyderm..., at 409012 to 409512 9850 mRNA_1483: 9851 - BLAST Protein priB [Grifola frondosa], at 409791 to 410399 9851 mRNA_1484: 9852 - HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF161111, at 410749 to 412587 9852

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
408,933 - 1.6
409,093 + 9850 mRNA_1482 0.16 -0.3
409,229 + 9850 mRNA_1482 0.43 -0.0
409,381 + 9850 mRNA_1482 0.74 -0.4
409,431 - 9850 mRNA_1482 0.84 0.0
409,456 + 9850 mRNA_1482 0.89 0.5
409,496 - -0.4
409,527 - -0.4
409,582 + 0.9
409,737 + 1.9
409,783 + 1.0
410,170 - 9851 mRNA_1483 0.62 -1.3
410,649 + -0.6
410,889 + -0.6
411,020 + 9852 mRNA_1484 0.15 1.5
411,097 + 9852 mRNA_1484 0.19 0.9
411,170 - 9852 mRNA_1484 0.23 0.7
411,382 + 9852 mRNA_1484 0.34 0.7