Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1444

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1444: 9812 - KOG4173 Alpha-SNAP protein, at 294219 to 295156 9812 mRNA_1445: 9813 - K20045 ITSN intersectin, at 295295 to 301799 9813

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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293,270 + 0.1
293,273 - -0.4
293,279 - 0.7
293,282 - -0.1
293,289 - 1.5
293,289 - -0.4
293,289 - 0.8
293,292 + -0.4
293,293 + -0.6
293,307 + 0.4
293,315 - -0.2
293,316 + -0.5
293,321 + -0.6
293,324 + -0.1
293,326 - 1.0
293,450 - 1.9
293,704 - 0.2
294,007 + 0.9
294,008 - 0.5
294,019 + 1.9
294,163 - 0.5
294,174 + -0.1
294,183 + 1.9
294,204 + 0.9
294,320 - 9812 mRNA_1444 0.11 -1.1
294,323 - 9812 mRNA_1444 0.11 0.2
294,485 + 9812 mRNA_1444 0.28 0.9
294,601 - 9812 mRNA_1444 0.41 2.8
294,743 - 9812 mRNA_1444 0.56 0.6
294,744 - 9812 mRNA_1444 0.56 1.4
294,907 - 9812 mRNA_1444 0.73 1.2
295,199 - -1.3
295,613 - -1.0
295,619 - 0.6
295,909 - 0.9
295,931 - -0.7
295,948 - 9813 mRNA_1445 0.10 -0.4
295,948 - 9813 mRNA_1445 0.10 -0.8