Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1326

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1326: 9694 - KOG1239 Inner membrane protein translocase involved in respiratory chain assembly, at 227 to 1696 9694 mRNA_1327: 9695 - K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41, at 2473 to 5541 9695

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1 + 0.5
25 + 0.3
49 - -0.4
50 + 0.6
53 + -0.0
57 - -0.3
57 + 0.7
58 - 0.3
62 + 0.6
62 - -0.6
76 + 2.3
109 + 0.6
122 + -0.9
125 - 1.5
126 + 0.8
128 - -0.1
134 + 1.1
143 + 0.2
144 + 0.4
148 + 0.7
176 - -0.3
186 + -0.4
199 + 0.8
240 + -1.1
240 + 0.9
250 + -0.5
250 + -0.1
256 - -0.9
279 + -1.5
282 + -1.6
286 - -0.6
290 + 1.2
542 - 9694 mRNA_1326 0.21 -2.0
545 + 9694 mRNA_1326 0.22 -0.7
726 - 9694 mRNA_1326 0.34 -2.6
1,007 + 9694 mRNA_1326 0.53 -1.5
1,016 - 9694 mRNA_1326 0.54 -2.8
1,322 - 9694 mRNA_1326 0.74 -2.4
1,417 - 9694 mRNA_1326 0.81 0.3
1,888 - -0.5
1,889 - -1.0
2,000 + -0.6
2,009 + 0.3
2,141 - -0.2
2,152 - 0.0
2,166 + 0.5
2,167 + -0.4
2,173 + 0.2
2,180 - 1.4
2,180 + -0.5
2,189 + 1.6
2,189 + -0.3
2,197 + -1.0
2,246 + 0.8
2,333 - -0.4
2,471 + -1.2
2,490 + -2.0