Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1266

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1265: 9633 - K14861 URB1 nucleolar pre-ribosomal-associated protein 1, at 784543 to 790877 9633 mRNA_1266: 9634 - K00004 BDH, butB (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase, at 791102 to 792635 9634 mRNA_1267: 9635 - K00814 GPT, ALT alanine transaminase, at 793138 to 795041 9635

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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791,013 + 0.2
791,024 - -0.2
791,024 - -0.7
791,025 + 0.1
791,027 - -0.0
791,041 + 0.8
791,044 - -0.5
791,045 - -1.0
791,177 + -0.1
791,703 - 9634 mRNA_1266 0.39 -2.9
791,740 + 9634 mRNA_1266 0.42 -0.2
792,352 - 9634 mRNA_1266 0.81 -0.7
792,640 + -0.1
792,755 - -0.0
792,761 - -0.2
792,762 - -0.1
792,789 - 0.7
792,789 + -0.6
792,808 - 0.6
792,844 + 0.4
792,846 + -0.2
792,846 + 0.8
792,910 + 1.9
792,943 - 0.4
792,997 + 1.4
793,028 - -4.4
793,032 - -1.2
793,055 - 0.5
793,058 - 1.3
793,065 + -0.5
793,072 - 0.3
793,075 - -0.2
793,084 + -0.2
793,165 + 0.0
793,167 - -2.5
793,218 + -2.2
793,223 - -2.4
793,351 - 9635 mRNA_1267 0.11 -4.4
793,354 + 9635 mRNA_1267 0.11 -2.3
793,370 - 9635 mRNA_1267 0.12 -4.2
793,373 + 9635 mRNA_1267 0.12 -2.2
793,500 - 9635 mRNA_1267 0.19 -2.6
793,507 + 9635 mRNA_1267 0.19 -1.3
793,521 - 9635 mRNA_1267 0.20 -2.4