Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1196

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1195: 9563 - K03248 EIF3G translation initiation factor 3 subunit G, at 624077 to 625434 9563 mRNA_1196: 9564 - HMMPfam-Membrane bound O-acyl transferase family-PF13813, at 626227 to 627477 9564

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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625,859 + 0.2
625,874 - -1.6
625,994 + -0.2
626,006 - 1.4
626,007 - -1.0
626,008 + -1.0
626,015 + 0.3
626,042 + 1.3
626,135 - 0.9
626,246 + 0.2
626,299 - 0.6
626,427 + 9564 mRNA_1196 0.16 0.8
626,707 - 9564 mRNA_1196 0.38 0.3
626,729 + 9564 mRNA_1196 0.40 0.5
626,876 + 9564 mRNA_1196 0.52 -0.7
627,005 + 9564 mRNA_1196 0.62 -2.0
627,254 + 9564 mRNA_1196 0.82 0.1
627,453 - -0.3
627,786 - 1.3
627,872 + 0.8
627,987 + -1.8
628,004 + 0.4
628,200 + 1.2
628,266 + 0.9
628,314 - -1.0
628,325 - -0.4
628,326 + 0.0
628,328 - -0.2
628,332 - 0.2
628,344 - -1.1
628,432 - -0.2
628,448 - -0.5