Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1125

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1124: 9492 - K09613 COPS5, CSN5 COP9 signalosome complex subunit 5, at 458374 to 459990 9492 mRNA_1125: 9493 - K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11, at 460316 to 462771 9493 mRNA_1126: 9494 - K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase, at 463118 to 466210 9494

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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459,403 + 9492 mRNA_1124 0.64 -1.5
459,958 - 0.4
459,988 - -1.3
460,185 - 0.4
460,255 + -0.1
460,419 - -1.5
460,556 - -0.5
461,435 + 9493 mRNA_1125 0.46 -0.2
461,593 + 9493 mRNA_1125 0.52 -0.4
462,019 - 9493 mRNA_1125 0.69 0.0
462,296 + 9493 mRNA_1125 0.81 -1.0
462,310 - 9493 mRNA_1125 0.81 0.9
462,313 + 9493 mRNA_1125 0.81 0.1
462,422 + 9493 mRNA_1125 0.86 -0.4
462,428 + 9493 mRNA_1125 0.86 1.1
462,444 + 9493 mRNA_1125 0.87 -0.2
462,574 + 0.0
462,741 + 0.1
462,902 + -1.4
462,906 + -0.1
463,049 - 0.5
463,138 + -0.9
463,281 - -0.1
463,290 + 0.1
463,343 - 0.1
463,723 + 9494 mRNA_1126 0.20 2.5