Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_863

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_862: 9230 - KOG2867 Phosphotyrosyl phosphatase activator, at 2065733 to 2067114 9230 mRNA_863: 9231 - K11254 H4 histone H4, at 2067725 to 2068182 9231 mRNA_864: 9232 - K11253 H3 histone H3, at 2068568 to 2069276 9232

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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2,066,787 + 9230 mRNA_862 0.76 -0.6
2,066,839 - 9230 mRNA_862 0.80 0.6
2,066,916 - 9230 mRNA_862 0.86 -0.9
2,066,945 + 9230 mRNA_862 0.88 0.3
2,066,956 - 9230 mRNA_862 0.88 -0.5
2,067,096 - -0.3
2,067,107 + -0.0
2,067,124 + 0.4
2,067,135 + -1.0
2,067,142 + -1.9
2,067,199 + 1.0
2,067,218 - 0.9
2,067,227 - 0.6
2,067,231 + -0.8
2,067,239 - 0.4
2,067,241 + 0.3
2,067,259 - -0.1
2,067,380 + -0.9
2,067,393 - 0.0
2,067,432 - -0.1
2,067,532 - -0.2
2,067,595 + -0.6
2,067,598 + -0.2
2,067,642 + 1.8
2,067,666 - 0.3
2,067,719 + 1.2
2,067,839 - 9231 mRNA_863 0.25 -0.6
2,067,850 + 9231 mRNA_863 0.27 -0.2
2,067,966 - 9231 mRNA_863 0.53 -0.4
2,068,003 - 9231 mRNA_863 0.61 -1.1
2,068,060 + 9231 mRNA_863 0.73 0.2
2,068,144 - 0.4
2,068,218 + 2.0
2,068,258 - 1.1
2,068,262 + 0.2
2,068,283 + -0.2
2,068,298 + 0.1
2,068,298 + 1.2
2,068,299 + 0.4
2,068,324 + 1.2
2,068,331 - 0.6
2,068,332 - 0.9
2,068,336 - 0.3
2,068,341 - -1.2
2,068,346 + -0.5
2,068,349 + 0.1
2,068,359 + -0.0
2,068,392 + 0.8
2,068,396 - 1.0
2,068,399 + 0.0
2,068,399 + 0.4
2,068,417 + 1.2
2,068,423 + -0.5
2,068,445 - 0.6
2,068,446 + -0.6
2,068,449 + 0.3
2,068,452 - -0.1
2,068,456 - 0.6
2,068,463 + -0.7
2,068,467 + -0.2
2,068,477 - 1.6
2,068,610 + 0.5
2,068,611 - -0.6
2,068,965 - 9232 mRNA_864 0.56 -0.6