Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_835

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_834: 9202 - HMMPfam-HIT zinc finger-PF04438,ProSiteProfiles-Zinc finger HIT-type profile.-PS51083,SUPERFAMILY--SSF144232, at 1998039 to 1998977 9202 mRNA_835: 9203 - K16365 SGTA small glutamine-rich tetratricopeptide repeat-containing protein alpha, at 1999158 to 2000866 9203 mRNA_836: 9204 - K17387 KIF23 kinesin family member 23, at 2001159 to 2005251 9204

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,999,053 - -0.4
1,999,151 - 0.8
1,999,169 - 0.2
1,999,174 - 1.8
1,999,614 + 9203 mRNA_835 0.27 -0.1
1,999,888 - 9203 mRNA_835 0.43 1.4
1,999,902 + 9203 mRNA_835 0.44 0.0
2,000,292 - 9203 mRNA_835 0.66 0.5
2,000,355 - 9203 mRNA_835 0.70 -0.3
2,000,601 - 9203 mRNA_835 0.84 -0.2
2,000,607 + 9203 mRNA_835 0.85 1.9
2,000,748 + 0.2
2,000,748 + -0.6
2,000,758 + 0.2
2,000,891 - 0.7
2,000,895 + 0.1
2,000,921 - -0.3
2,001,235 - 0.3
2,001,294 - -0.3
2,001,304 + -0.1
2,001,350 - -0.3
2,001,459 - -0.1
2,001,569 + 9204 mRNA_836 0.10 -0.2
2,001,611 - 9204 mRNA_836 0.11 -1.5
2,001,630 + 9204 mRNA_836 0.12 1.4
2,001,752 - 9204 mRNA_836 0.14 -0.9
2,001,772 - 9204 mRNA_836 0.15 0.1