Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_833

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_832: 9200 - K08835 OXSR1, STK39 serine/threonine-protein kinase OSR1/STK39, at 1993730 to 1995894 9200 mRNA_833: 9201 - HMMPfam-Homeobox domain-PF00046,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689, at 1996035 to 1997724 9201 mRNA_834: 9202 - HMMPfam-HIT zinc finger-PF04438,ProSiteProfiles-Zinc finger HIT-type profile.-PS51083,SUPERFAMILY--SSF144232, at 1998039 to 1998977 9202

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,995,113 - 9200 mRNA_832 0.64 -0.2
1,995,274 - 9200 mRNA_832 0.71 -0.1
1,995,422 + 9200 mRNA_832 0.78 -0.4
1,995,692 + 1.0
1,996,023 + 0.6
1,996,183 - 2.2
1,996,204 + 9201 mRNA_833 0.10 1.2
1,996,324 - 9201 mRNA_833 0.17 -3.1
1,996,416 - 9201 mRNA_833 0.23 -0.1
1,996,649 + 9201 mRNA_833 0.36 0.4
1,997,093 - 9201 mRNA_833 0.63 -1.3
1,997,098 + 9201 mRNA_833 0.63 -0.5
1,997,382 + 9201 mRNA_833 0.80 -0.5
1,997,705 - -0.5
1,997,830 + 0.7
1,997,831 - 0.1
1,997,872 + 0.0