Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_826

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_825: 9193 - HMMPfam-Modifier of rudimentary (Mod(r)) protein-PF07200,ProSiteProfiles-VPS37 C-terminal domain profile.-PS51314,SUPERFAMILY--SSF140111, at 1976044 to 1976786 9193 mRNA_826: 9194 - HMMPfam-T-complex protein 11-PF05794, at 1977026 to 1979152 9194 mRNA_827: 9195 - Hypothetical Protein, at 1979229 to 1980332 9195

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,976,030 - -1.2
1,976,340 - 9193 mRNA_825 0.40 -0.3
1,976,616 - 9193 mRNA_825 0.77 -2.4
1,976,663 + 9193 mRNA_825 0.83 -1.6
1,976,799 + -0.6
1,976,836 - 0.3
1,976,939 + 0.1
1,976,939 - -0.2
1,976,959 - 0.6
1,977,106 + -2.2
1,977,261 + 9194 mRNA_826 0.11 0.3
1,977,273 - 9194 mRNA_826 0.12 0.0
1,978,150 + 9194 mRNA_826 0.53 0.9
1,978,313 - 9194 mRNA_826 0.61 -0.3
1,978,562 + 9194 mRNA_826 0.72 0.2
1,978,583 - 9194 mRNA_826 0.73 0.2
1,978,624 - 9194 mRNA_826 0.75 0.6
1,978,660 + 9194 mRNA_826 0.77 1.5
1,978,760 - 9194 mRNA_826 0.82 -1.7
1,978,875 - 9194 mRNA_826 0.87 0.7
1,978,896 + 9194 mRNA_826 0.88 2.2
1,978,953 - -0.2
1,978,970 + 0.4
1,979,039 - -0.8
1,979,063 + -1.3
1,979,082 + 0.4
1,979,108 - 1.2
1,979,133 - 0.1
1,979,140 + 0.6
1,979,174 - 0.3
1,979,358 + 9195 mRNA_827 0.12 -0.6
1,979,956 - 9195 mRNA_827 0.66 0.3
1,980,069 - 9195 mRNA_827 0.76 -0.7
1,980,080 + 9195 mRNA_827 0.77 0.2