Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_811

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_811: 9179 - Interpro Glycosyl-transferase for dystroglycan, at 1929114 to 1931965 9179 mRNA_812: 9180 - K00474 TMLHE trimethyllysine dioxygenase, at 1932438 to 1934306 9180

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,928,115 - -1.2
1,928,122 + -0.2
1,928,289 - 0.4
1,928,290 + -0.2
1,928,290 + -1.4
1,928,313 - -1.2
1,928,319 - -1.9
1,928,319 - 0.7
1,928,436 - -0.6
1,928,458 - -0.1
1,928,459 + 1.4
1,928,465 + -0.8
1,928,467 - 0.7
1,928,477 + 2.5
1,928,484 + 1.0
1,928,592 + 1.1
1,928,595 + 0.2
1,928,598 - 0.7
1,928,605 + 0.1
1,928,616 - 0.4
1,928,620 - 2.0
1,928,625 + 0.2
1,928,637 - 1.1
1,928,645 + -1.1
1,928,738 + -0.4
1,928,782 + 0.5
1,929,084 - 1.5
1,929,220 - -0.1
1,929,395 - 0.5
1,929,398 + 0.5
1,929,800 - 9179 mRNA_811 0.24 1.2
1,930,905 - 9179 mRNA_811 0.63 0.6
1,931,057 + 9179 mRNA_811 0.68 0.8
1,931,379 - 9179 mRNA_811 0.79 0.1
1,931,434 + 9179 mRNA_811 0.81 1.9
1,932,103 - 1.0