Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_806

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_805: 9173 - K09191 GTF3A general transcription factor IIIA, at 1913396 to 1915422 9173 mRNA_806: 9174 - KOG1515 Arylacetamide deacetylase, at 1915696 to 1917845 9174 mRNA_807: 9175 - Hypothetical Protein, at 1918454 to 1920655 9175

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,915,423 + -0.3
1,915,480 - 0.4
1,915,860 + 0.6
1,916,118 - 9174 mRNA_806 0.20 -0.1
1,916,120 - 9174 mRNA_806 0.20 -0.9
1,916,134 - 9174 mRNA_806 0.20 0.6
1,916,327 - 9174 mRNA_806 0.29 0.3
1,916,402 - 9174 mRNA_806 0.33 0.4
1,916,850 + 9174 mRNA_806 0.54 0.1
1,917,510 - 9174 mRNA_806 0.84 -0.8
1,917,579 - 9174 mRNA_806 0.88 -1.3
1,917,901 + 1.4
1,917,903 + 1.4
1,917,904 - 0.0
1,917,904 + -0.3
1,917,919 - -1.0
1,917,920 - 0.6
1,917,922 + -0.1
1,917,922 + -0.3
1,917,925 + 1.0
1,917,927 + -0.1
1,917,932 - -0.0
1,917,934 + -0.0
1,917,960 - 0.6
1,917,964 - 0.2
1,917,967 + -0.3
1,917,972 + 0.4
1,917,981 - 1.6
1,918,152 - -0.3
1,918,173 - 1.1
1,918,174 + -0.1
1,918,178 - 0.6
1,918,184 - 0.5
1,918,194 - 0.7
1,918,309 - 1.5
1,918,466 + 2.0
1,918,466 + 1.1
1,918,467 - -1.2
1,918,493 - 0.6
1,918,505 + -0.7
1,918,655 - -0.4