Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_762

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_761: 9129 - KOG2919 Guanine nucleotide-binding protein, at 1818888 to 1820583 9129 mRNA_762: 9130 - K11090 LA, SSB lupus La protein, at 1820887 to 1822873 9130 mRNA_763: 9131 - KOG4686 Predicted sugar transporter, at 1823279 to 1825136 9131

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,819,891 - 9129 mRNA_761 0.59 -0.9
1,820,028 + 9129 mRNA_761 0.67 0.8
1,820,039 - 9129 mRNA_761 0.68 0.5
1,820,192 - 9129 mRNA_761 0.77 -0.5
1,820,618 + 1.5
1,820,634 + 1.8
1,820,657 + 2.1
1,820,677 - -2.4
1,820,772 - -0.5
1,820,783 + 0.4
1,820,794 + -0.6
1,820,799 - 0.0
1,820,814 + 0.3
1,822,243 - 9130 mRNA_762 0.68 0.4
1,822,576 - 9130 mRNA_762 0.85 -0.9
1,822,691 - -0.0
1,822,989 - 0.5
1,822,989 + 1.2
1,823,143 - -1.2
1,823,170 - -0.0
1,823,175 + 1.2
1,823,192 + 1.2
1,823,319 - -1.0
1,823,455 + 0.2
1,823,607 + 9131 mRNA_763 0.18 0.8