Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_706

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_705: 9073 - Hypothetical Protein, at 1686882 to 1687681 9073 mRNA_706: 9074 - BLAST Myelin gene regulatory factor [Chaetura pelagica], at 1688032 to 1688891 9074 mRNA_707: 9075 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1689670 to 1691771 9075

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,687,107 + 9073 mRNA_705 0.28 -1.0
1,687,249 - 9073 mRNA_705 0.46 -0.9
1,687,254 - 9073 mRNA_705 0.47 -0.8
1,687,385 - 9073 mRNA_705 0.63 -0.3
1,687,521 + 9073 mRNA_705 0.80 0.5
1,687,550 + 9073 mRNA_705 0.83 1.4
1,687,719 + 0.6
1,687,813 - -0.2
1,687,951 - -1.4
1,687,960 + -1.5
1,687,967 - -0.1
1,688,101 - -0.4
1,688,102 - 0.1
1,688,117 + 0.4
1,688,265 - 9074 mRNA_706 0.27 -1.1
1,688,381 - 9074 mRNA_706 0.41 3.0
1,688,548 + 9074 mRNA_706 0.60 -0.9
1,688,706 + 9074 mRNA_706 0.78 1.8
1,688,802 - 9074 mRNA_706 0.90 1.4
1,688,981 - 1.8
1,689,101 - -0.0
1,689,109 + -0.8
1,689,131 - 0.3
1,689,145 + 1.6
1,689,283 + 0.8
1,689,408 + -0.5
1,689,558 - -1.1
1,689,584 + 1.9
1,689,602 + 0.1