Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_576

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_575: 8943 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1378684 to 1379466 8943 mRNA_576: 8944 - K20182 VPS33 vacuolar protein sorting-associated protein 33, at 1379753 to 1382507 8944 mRNA_577: 8945 - Hypothetical Protein, at 1382684 to 1384433 8945

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,378,801 - 8943 mRNA_575 0.15 1.6
1,379,431 + -1.0
1,379,527 + 0.3
1,379,685 - 0.7
1,379,804 - 0.9
1,380,101 + 8944 mRNA_576 0.13 -0.9
1,380,222 - 8944 mRNA_576 0.17 -1.5
1,382,650 + -2.2
1,382,736 + -0.4