Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_248

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_247: 8615 - K11254 H4 histone H4, at 602212 to 602729 8615 mRNA_248: 8616 - K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase, at 603396 to 605038 8616 mRNA_249: 8617 - K03538 POP4, RPP29 ribonuclease P protein subunit POP4, at 605214 to 606480 8617

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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603,322 - 0.2
603,445 + 1.2
603,740 + 8616 mRNA_248 0.21 1.1
603,945 + 8616 mRNA_248 0.33 -0.3
604,072 + 8616 mRNA_248 0.41 0.0
604,084 + 8616 mRNA_248 0.42 -0.1
604,349 + 8616 mRNA_248 0.58 0.2
604,379 - 8616 mRNA_248 0.60 0.3
604,516 - 8616 mRNA_248 0.68 -0.3
604,521 + 8616 mRNA_248 0.68 0.1
604,804 - 8616 mRNA_248 0.86 0.4
604,812 - 8616 mRNA_248 0.86 0.8
604,817 + 8616 mRNA_248 0.86 2.2
604,958 + 1.7
605,085 - -1.0
605,089 - 0.2
605,099 + -1.2
605,101 + -0.1
605,110 - 0.1
605,118 + 2.1
605,119 + -1.1
605,137 + -0.5
605,138 + 1.1
605,213 - -0.5