Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_93

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_93: 8461 - ProSiteProfiles-BTB domain profile.-PS50097, at 219909 to 221427 8461 mRNA_94: 8462 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 221579 to 223787 8462

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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219,036 + 0.4
219,050 - -0.7
219,077 + 1.3
219,109 + -0.6
219,176 + -2.2
219,207 + 0.5
219,221 - -1.7
219,225 + -1.2
219,234 + 0.8
219,236 + 0.8
219,244 + 0.4
219,245 - -0.2
219,250 + 0.1
219,252 + -0.2
219,255 - 0.0
219,263 - 0.2
219,275 + -0.2
219,278 - -0.2
219,287 - 0.5
219,294 - -0.3
219,393 + -0.2
219,399 - -0.8
219,406 - -0.9
219,408 - -1.0
219,508 - -0.2
219,529 + -1.3
219,532 + -0.9
219,542 - -2.3
219,546 - 2.4
219,547 + -1.1
219,668 - 0.2
219,669 - 0.8
219,672 + 1.2
219,999 + 0.1
220,132 - 8461 mRNA_93 0.15 1.0
220,138 - 8461 mRNA_93 0.15 0.4
220,415 - 8461 mRNA_93 0.33 0.9
220,442 + 8461 mRNA_93 0.35 0.1
221,592 - 1.0
221,611 + 1.0
221,664 + 1.6
221,749 + -0.4
222,058 + 8462 mRNA_94 0.22 0.3
222,064 - 8462 mRNA_94 0.22 0.5