Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8402

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8401: 16769 - K16315 GSG2 serine/threonine-protein kinase haspin, at 1130370 to 1132967 16769 mRNA_8402: 16770 - K07579 K07579 putative methylase, at 1133086 to 1134230 16770 mRNA_8403: 16771 - K08829 MAK male germ cell-associated kinase, at 1134667 to 1138585 16771

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,132,423 - 16769 mRNA_8401 0.79 0.9
1,132,689 - 16769 mRNA_8401 0.89 0.3
1,132,694 + 16769 mRNA_8401 0.89 0.0
1,132,694 + 16769 mRNA_8401 0.89 1.7
1,132,760 - -1.5
1,132,863 - -2.9
1,132,988 - 0.4
1,133,103 + 0.1
1,133,123 - -0.2
1,133,131 + -2.2
1,133,150 - -0.0
1,133,165 + -0.2
1,133,167 + -0.3
1,133,189 + 0.6
1,133,398 + 16770 mRNA_8402 0.27 2.5
1,133,400 - 16770 mRNA_8402 0.27 1.0
1,133,454 + 16770 mRNA_8402 0.32 1.5
1,133,943 + 16770 mRNA_8402 0.75 1.3
1,133,947 - 16770 mRNA_8402 0.75 -0.4
1,133,987 + 16770 mRNA_8402 0.79 1.8
1,134,006 - 16770 mRNA_8402 0.80 0.1
1,134,089 + 16770 mRNA_8402 0.88 0.5
1,134,142 - -0.1
1,134,152 - 0.4
1,134,157 - -2.8
1,134,302 + 2.2
1,134,446 + -0.4
1,134,454 + 0.6
1,134,475 + -0.1
1,134,484 - -0.6
1,134,613 + 0.1
1,134,744 - -1.7
1,134,772 + -0.1
1,135,010 + 0.4