Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8358

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8357: 16725 - K01739 metB cystathionine gamma-synthase, at 1021277 to 1023018 16725 mRNA_8358: 16726 - HMMPfam-Bin/amphiphysin/Rvs domain for vesicular trafficking-PF10455,HMMPfam-Fungal specific transcription factor domain-PF11951,SMART--SM00721,SUPERFAMILY--SSF103657, at 1023187 to 1029066 16726 mRNA_8359: 16727 - Hypothetical Protein, at 1029156 to 1031168 16727

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,022,259 - 16725 mRNA_8357 0.56 -0.2
1,022,378 - 16725 mRNA_8357 0.63 -0.1
1,022,445 - 16725 mRNA_8357 0.67 -0.2
1,022,672 - 16725 mRNA_8357 0.80 0.7
1,022,794 - 16725 mRNA_8357 0.87 0.1
1,022,818 + 16725 mRNA_8357 0.88 1.2
1,023,877 - 16726 mRNA_8358 0.12 -1.0
1,023,910 - 16726 mRNA_8358 0.12 0.0
1,023,947 + 16726 mRNA_8358 0.13 -0.4
1,024,004 + 16726 mRNA_8358 0.14 -1.2
1,024,413 - 16726 mRNA_8358 0.21 0.5
1,024,447 + 16726 mRNA_8358 0.21 -0.0
1,024,612 + 16726 mRNA_8358 0.24 -1.2
1,024,625 + 16726 mRNA_8358 0.24 0.6
1,024,901 - 16726 mRNA_8358 0.29 -0.5
1,025,069 + 16726 mRNA_8358 0.32 0.7
1,025,212 + 16726 mRNA_8358 0.34 1.5
1,025,334 - 16726 mRNA_8358 0.37 1.2
1,025,503 + 16726 mRNA_8358 0.39 -0.1
1,025,507 + 16726 mRNA_8358 0.39 -1.7
1,025,534 + 16726 mRNA_8358 0.40 0.7
1,025,640 + 16726 mRNA_8358 0.42 0.2
1,025,646 + 16726 mRNA_8358 0.42 0.5
1,025,661 + 16726 mRNA_8358 0.42 -0.6
1,025,674 + 16726 mRNA_8358 0.42 0.1
1,025,789 + 16726 mRNA_8358 0.44 -0.3
1,025,933 + 16726 mRNA_8358 0.47 1.8
1,025,953 - 16726 mRNA_8358 0.47 2.1
1,025,959 + 16726 mRNA_8358 0.47 1.4
1,026,526 - 16726 mRNA_8358 0.57 -0.5
1,026,539 + 16726 mRNA_8358 0.57 0.6
1,026,762 + 16726 mRNA_8358 0.61 0.8
1,026,924 - 16726 mRNA_8358 0.64 0.8
1,026,932 + 16726 mRNA_8358 0.64 0.5
1,027,372 - 16726 mRNA_8358 0.71 0.9
1,027,513 + 16726 mRNA_8358 0.74 0.6
1,027,525 + 16726 mRNA_8358 0.74 0.3
1,027,538 - 16726 mRNA_8358 0.74 -0.7
1,027,663 + 16726 mRNA_8358 0.76 -0.3
1,027,667 - 16726 mRNA_8358 0.76 -0.1
1,027,668 + 16726 mRNA_8358 0.76 1.1
1,027,671 - 16726 mRNA_8358 0.76 0.5
1,027,671 - 16726 mRNA_8358 0.76 1.4
1,027,672 - 16726 mRNA_8358 0.76 -0.5
1,027,684 + 16726 mRNA_8358 0.76 0.0
1,027,686 + 16726 mRNA_8358 0.77 -2.0
1,027,691 + 16726 mRNA_8358 0.77 1.6
1,027,693 + 16726 mRNA_8358 0.77 1.2
1,027,697 - 16726 mRNA_8358 0.77 -0.7
1,027,700 + 16726 mRNA_8358 0.77 0.1
1,027,707 + 16726 mRNA_8358 0.77 -1.0
1,027,716 + 16726 mRNA_8358 0.77 -0.7
1,027,716 + 16726 mRNA_8358 0.77 1.9
1,027,721 - 16726 mRNA_8358 0.77 0.4
1,027,746 - 16726 mRNA_8358 0.78 1.9
1,027,829 - 16726 mRNA_8358 0.79 1.0
1,027,833 + 16726 mRNA_8358 0.79 -1.4
1,027,835 + 16726 mRNA_8358 0.79 0.4
1,027,976 - 16726 mRNA_8358 0.81 0.5
1,028,154 + 16726 mRNA_8358 0.84 -0.3
1,028,334 + 16726 mRNA_8358 0.88 2.5
1,028,380 + 16726 mRNA_8358 0.88 0.8
1,028,391 - 16726 mRNA_8358 0.89 0.6
1,028,402 - 16726 mRNA_8358 0.89 0.0
1,028,450 + 16726 mRNA_8358 0.90 0.8
1,028,458 + 16726 mRNA_8358 0.90 0.2
1,028,472 + 16726 mRNA_8358 0.90 -0.3
1,028,495 + -0.8
1,028,551 - 1.2
1,028,635 + -0.6
1,028,753 + -0.4
1,028,763 - 1.2
1,028,873 + -0.4
1,028,924 - 1.4
1,029,147 + 0.6
1,029,365 + 16727 mRNA_8359 0.10 2.2
1,029,617 - 16727 mRNA_8359 0.23 0.2
1,029,781 + 16727 mRNA_8359 0.31 -0.6
1,029,783 + 16727 mRNA_8359 0.31 0.3
1,029,906 - 16727 mRNA_8359 0.37 -0.3