Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8333

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8332: 16700 - K10082 LMAN2, VIP36 lectin, mannose-binding 2, at 956796 to 958192 16700 mRNA_8333: 16701 - SUPERFAMILY--SSF55781, at 958557 to 960459 16701 mRNA_8334: 16702 - BLAST mtf1_muccl ame full transcription factor mtf1 [Licht..., at 961362 to 964238 16702

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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957,654 - 16700 mRNA_8332 0.61 1.2
957,795 - 16700 mRNA_8332 0.72 1.1
957,912 + 16700 mRNA_8332 0.80 0.4
957,915 - 16700 mRNA_8332 0.80 1.2
958,060 - 2.0
958,061 + 1.3
958,066 - 1.5
958,087 + 0.9
958,147 - 0.9
958,230 + 0.7
958,231 - 0.5
958,359 - -0.2
958,384 - 0.4
958,385 + 0.5
958,485 - 0.1
958,669 - 0.4
958,670 + 0.4
958,833 + 16701 mRNA_8333 0.15 0.5
959,139 - 16701 mRNA_8333 0.31 -0.7
959,263 + 16701 mRNA_8333 0.37 0.1
960,148 + 16701 mRNA_8333 0.84 0.8
960,155 - 16701 mRNA_8333 0.84 0.4
960,270 - 1.2
960,446 + 1.4
960,569 - 0.8
960,577 + -0.5
960,597 - -1.0
960,611 - 0.3
960,616 + 0.3
960,706 + 0.1
960,753 + -0.1
960,755 + 0.1
960,757 + -0.0
960,767 - 0.0
960,767 + -1.3
960,768 + 0.4
960,774 + -0.1
960,774 + -0.1
960,775 + -0.9
960,777 - 0.6
960,780 + -1.2
960,784 - 0.1
960,784 - 1.1
960,785 + 0.4
960,785 + -0.9
960,787 - -0.3
960,795 - 0.3
960,796 + -0.1
960,797 - -0.2
960,801 + -0.1
960,802 + -0.3
960,805 + 0.2
960,805 + 1.2
960,810 + 0.2
960,811 - -0.8
960,813 - -0.9
960,822 + -1.0
960,825 + 0.2
960,834 - 0.5
960,836 + 0.7
960,847 + -0.7
960,852 - 0.1
960,861 - -0.7
960,868 - 0.6
960,870 - -0.6
960,872 - 0.1
960,873 - 0.2
960,887 + -0.8
960,919 - 0.4
960,922 + -0.5
960,925 - -0.0
960,927 - -0.3
960,930 + 0.1
960,933 + -2.3
960,935 - 0.2
960,938 - 1.3
960,939 + -1.3
960,948 + 0.9
960,949 + 0.2
960,952 - -1.1
960,952 - 0.4
960,953 + -0.2
960,955 + 0.9
960,955 - 1.0
960,957 + 0.4
960,989 + -1.4
960,999 + -1.2
961,027 + 0.7
961,042 - -0.1
961,064 - 0.3
961,211 + 1.3
961,257 - 0.3
961,333 - 0.0