Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8320

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8319: 16687 - HMMPfam-Protein of unknown function (DUF2370)-PF10176, at 930724 to 932736 16687 mRNA_8320: 16688 - KOG1516 Carboxylesterase and related proteins, at 932873 to 935850 16688 mRNA_8321: 16689 - Hypothetical Protein, at 936288 to 937256 16689

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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931,888 - 16687 mRNA_8319 0.58 0.4
932,068 - 16687 mRNA_8319 0.67 0.4
932,167 + 16687 mRNA_8319 0.72 0.3
932,170 + 16687 mRNA_8319 0.72 0.8
932,183 + 16687 mRNA_8319 0.72 -0.6
932,190 + 16687 mRNA_8319 0.73 0.0
932,194 - 16687 mRNA_8319 0.73 -0.9
932,334 - 16687 mRNA_8319 0.80 1.1
932,369 - 16687 mRNA_8319 0.82 1.7
932,493 + 16687 mRNA_8319 0.88 0.2
932,500 + 16687 mRNA_8319 0.88 -0.1
932,785 - -0.8
932,941 + 1.1
933,067 + -0.5
933,082 + -0.3
933,249 + 16688 mRNA_8320 0.13 0.0
933,528 + 16688 mRNA_8320 0.22 0.6
933,666 + 16688 mRNA_8320 0.27 -0.6
933,669 - 16688 mRNA_8320 0.27 -0.3
933,848 - 16688 mRNA_8320 0.33 -0.6
933,943 - 16688 mRNA_8320 0.36 1.8
934,091 - 16688 mRNA_8320 0.41 -0.4
934,104 + 16688 mRNA_8320 0.41 -0.5
934,133 + 16688 mRNA_8320 0.42 -1.2
934,434 + 16688 mRNA_8320 0.52 0.6
934,788 - 16688 mRNA_8320 0.64 -1.3
934,837 - 16688 mRNA_8320 0.66 0.2
934,953 + 16688 mRNA_8320 0.70 2.0
935,413 + 16688 mRNA_8320 0.85 -0.8
935,529 + 16688 mRNA_8320 0.89 0.4
936,076 - 0.4
936,082 + 0.5
936,251 + -0.4
936,261 + 0.4
936,386 - 16689 mRNA_8321 0.10 0.1
936,416 - 16689 mRNA_8321 0.13 1.3
936,419 + 16689 mRNA_8321 0.14 -0.4
936,556 + 16689 mRNA_8321 0.28 0.2
936,669 + 16689 mRNA_8321 0.39 -0.0
936,685 + 16689 mRNA_8321 0.41 0.2