Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8271

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8270: 16638 - Hypothetical Protein, at 812469 to 813656 16638 mRNA_8271: 16639 - K14397 NUDT21, CPSF5, CFIM25 cleavage and polyadenylation specificity factor subunit 5, at 814047 to 815109 16639 mRNA_8272: 16640 - K07750 E1.14.13.72, SC4MOL, ERG25 methylsterol monooxygenase, at 815448 to 817149 16640

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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813,155 + 16638 mRNA_8270 0.58 -1.3
813,173 + 16638 mRNA_8270 0.59 -0.4
813,226 + 16638 mRNA_8270 0.64 1.1
813,282 + 16638 mRNA_8270 0.68 0.6
813,592 + 1.5
813,682 + -2.0
813,728 + 0.5
813,866 - 0.7
813,874 + 0.0
813,874 + 0.8
814,025 - 0.0
814,032 - 0.6
814,038 + -2.2
814,050 - 0.0
814,144 - -0.1
814,156 - 16639 mRNA_8271 0.10 1.1
814,289 - 16639 mRNA_8271 0.23 0.1
814,311 - 16639 mRNA_8271 0.25 -0.4
814,316 + 16639 mRNA_8271 0.25 1.8
814,317 - 16639 mRNA_8271 0.25 -0.1
814,318 - 16639 mRNA_8271 0.25 -0.6
814,609 - 16639 mRNA_8271 0.53 -0.8
814,625 - 16639 mRNA_8271 0.54 1.2
814,631 + 16639 mRNA_8271 0.55 1.3
814,636 + 16639 mRNA_8271 0.55 0.5
814,713 - 16639 mRNA_8271 0.63 -0.5
814,728 - 16639 mRNA_8271 0.64 0.9
814,731 - 16639 mRNA_8271 0.64 1.6
814,780 + 16639 mRNA_8271 0.69 1.1
814,857 + 16639 mRNA_8271 0.76 0.6
814,871 + 16639 mRNA_8271 0.78 1.9
814,873 + 16639 mRNA_8271 0.78 -0.7
814,875 + 16639 mRNA_8271 0.78 1.8
814,895 - 16639 mRNA_8271 0.80 0.6
814,897 - 16639 mRNA_8271 0.80 0.4
814,898 + 16639 mRNA_8271 0.80 0.7
814,901 + 16639 mRNA_8271 0.80 0.6
814,901 + 16639 mRNA_8271 0.80 -0.3
814,919 - 16639 mRNA_8271 0.82 1.7
814,984 + 16639 mRNA_8271 0.88 -1.8
815,014 - -0.2
815,018 - -1.2
815,020 - -0.1
815,047 - 0.4
815,047 + 1.3
815,049 - 0.6
815,055 + -1.4
815,061 + -0.5
815,064 + -1.2
815,076 + 0.6
815,145 - -1.0
815,149 - -0.2
815,153 - 0.8
815,155 - 1.4
815,166 - 0.9
815,168 + 0.2
815,170 - 1.9
815,178 - -0.1
815,189 + -0.7
815,198 - 2.5
815,200 - -0.2
815,201 + 1.9
815,214 - -0.9
815,214 - 0.1
815,217 + -0.3
815,218 - 0.4
815,220 - -0.9
815,221 - -0.7
815,223 + -0.9
815,225 - -0.3
815,292 - -1.6
815,310 - -0.4
815,322 - -0.3
815,350 - -0.1
815,351 - -1.3
815,354 - 1.6
815,364 - 0.0