Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8188

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8187: 16555 - K10949 KDELR ER lumen protein retaining receptor, at 624425 to 625437 16555 mRNA_8188: 16556 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 625723 to 629622 16556 mRNA_8189: 16557 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 629881 to 631255 16557

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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625,501 - -0.1
625,616 + 1.1
625,620 + 0.9
625,627 - 0.1
625,809 + 0.2
625,936 - 0.6
625,938 - -0.1
627,696 + 16556 mRNA_8188 0.51 1.4
628,571 - 16556 mRNA_8188 0.73 0.3
628,579 - 16556 mRNA_8188 0.73 0.8
628,717 + 16556 mRNA_8188 0.77 1.5
629,300 + 1.4
629,320 + 0.8
629,858 + 0.1
630,012 + -1.8
630,023 - 16557 mRNA_8189 0.10 -0.6
630,334 - 16557 mRNA_8189 0.33 0.3
630,454 - 16557 mRNA_8189 0.42 -0.3
630,461 + 16557 mRNA_8189 0.42 0.8
630,464 + 16557 mRNA_8189 0.42 -1.6
630,605 - 16557 mRNA_8189 0.53 -0.4