Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8159

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8158: 16526 - K14004 SEC13 protein transport protein SEC13, at 552046 to 553498 16526 mRNA_8159: 16527 - K17607 TIPRL, TIP41 type 2A phosphatase activator TIP41, at 553684 to 555009 16527 mRNA_8160: 16528 - K01873 VARS, valS valyl-tRNA synthetase, at 555144 to 559347 16528

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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553,564 + 1.7
553,568 + -1.2
553,692 + 1.3
553,698 + 1.1
553,700 + 1.6
553,717 + 0.6
553,792 - 1.0
553,838 - 16527 mRNA_8159 0.12 0.7
554,139 - 16527 mRNA_8159 0.34 1.0
554,157 + 16527 mRNA_8159 0.36 1.8
554,277 + 16527 mRNA_8159 0.45 0.0
554,449 + 16527 mRNA_8159 0.58 0.4
555,018 + -0.2