Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8156

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541110 to 545271 16523 mRNA_8156: 16524 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 545872 to 548769 16524 mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549657 to 551853 16525

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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544,872 - 0.0
544,880 + -0.5
545,039 - -0.4
545,180 - 0.7
545,342 + -1.3
545,459 + 1.3
545,470 + 0.5
545,490 - 1.3
545,649 - -0.6
545,710 + -0.4
545,778 - 0.4
545,784 - -0.6
545,786 - -0.0
545,905 + 0.8
546,099 + -2.7
546,251 + 16524 mRNA_8156 0.13 -0.0
546,502 + 16524 mRNA_8156 0.22 0.2
546,943 + 16524 mRNA_8156 0.37 -0.1
547,110 + 16524 mRNA_8156 0.43 0.0
547,129 - 16524 mRNA_8156 0.43 -1.0
547,146 - 16524 mRNA_8156 0.44 -1.0
547,175 - 16524 mRNA_8156 0.45 -0.3
547,216 - 16524 mRNA_8156 0.46 -1.5
547,394 - 16524 mRNA_8156 0.53 -0.6
547,486 - 16524 mRNA_8156 0.56 0.2
547,536 - 16524 mRNA_8156 0.57 -2.4
547,579 - 16524 mRNA_8156 0.59 -0.6
547,681 + 16524 mRNA_8156 0.62 -1.3
547,724 + 16524 mRNA_8156 0.64 -1.4
548,131 - 16524 mRNA_8156 0.78 -2.1
548,244 - 16524 mRNA_8156 0.82 -0.5
548,527 + -1.3
548,561 + -1.4
548,562 - -2.2
548,581 + -0.5
548,630 - -0.6
548,792 - -1.3
548,801 + -1.0
548,823 + -0.6
548,843 - 0.8
548,846 - -0.9
548,847 - -1.0
548,850 + -1.4
548,860 + -2.0
548,863 + -1.7
548,865 + 0.5
548,940 - -2.0
548,961 - -1.4
548,963 - -0.7
548,964 - 0.0
548,966 + -0.6
548,973 - 1.3
548,974 - -0.4
548,987 + -1.1
548,990 + -2.0
548,992 + -1.0
548,995 - -0.8
549,025 - -1.0
549,025 - 0.0
549,027 + -1.2
549,029 - 0.5
549,030 - -0.8
549,036 + 0.9
549,044 + -0.4
549,045 + -0.7
549,059 - -0.3
549,064 + -1.0
549,064 + -0.8
549,108 + -1.0
549,109 + -1.9
549,109 - -1.1
549,140 - -0.4
549,143 - -1.0
549,207 + -0.7
549,230 + -0.8
549,275 + -0.1
549,276 + 0.2
549,285 + -0.9
549,286 - -1.2
549,287 - -2.1
549,291 - -0.6
549,293 - -0.0
549,293 - 0.7
549,297 - -0.4
549,298 - -1.1
549,299 + 0.5
549,299 - -0.5
549,300 + -0.5
549,302 - 0.6
549,314 - -0.9
549,323 + 0.2
549,324 + 0.9
549,332 - -0.2
549,333 - -1.4
549,333 - -0.3
549,334 + 2.3
549,335 + -0.9
549,341 + -0.9
549,346 + -1.4
549,349 + 0.1
549,361 + 0.3
549,364 + 1.0
549,364 - -0.7
549,405 - -0.3
549,406 + -1.7
549,419 - -0.7
549,423 - -0.3
549,424 + 0.1
549,424 - -0.6
549,426 + -1.6
549,429 - -0.6
549,430 - -0.8
549,435 + -1.4
549,435 - -2.0
549,440 + 1.0
549,441 + -0.3
549,469 + -1.9
549,482 - -0.4
549,566 - 0.0
549,576 - -1.2
549,595 + -1.0
549,597 - 1.5
549,598 + -0.1
549,610 - -0.1
549,616 + 0.2
549,619 + -0.4
549,624 + -2.1
549,625 - 1.1
549,634 + -0.9
549,642 - 0.7
549,645 + 0.8
549,654 + -0.2
549,659 - -1.3
549,672 - -0.0
549,682 - -0.3
549,685 - -1.8
549,686 + 0.0
549,687 - -1.1
549,689 + 0.6
549,692 + 0.5
549,700 - -0.7
549,701 + -1.0
549,713 + -0.9
549,713 + 1.8
549,746 + 0.4
549,754 + 0.7