Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8010

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8009: 16377 - K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase, at 204199 to 205713 16377 mRNA_8010: 16378 - K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial, at 206291 to 207434 16378 mRNA_8011: 16379 - K09537 DNAJC17 DnaJ homolog subfamily C member 17, at 207819 to 208967 16379

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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205,797 - 1.3
205,808 - 0.9
205,821 - 0.8
205,965 - -0.7
205,969 + 0.5
205,970 + 0.4
205,984 + 0.7
205,999 - 1.2
206,007 + 1.7
206,009 + 1.0
206,087 - 0.2
206,106 - 0.0
206,125 - -0.0
206,172 + -0.1
206,175 - 1.0
207,025 + 16378 mRNA_8010 0.64 -1.2
207,296 - 16378 mRNA_8010 0.88 0.2
207,492 - -0.7
207,505 + 0.9
207,506 + 0.3
207,645 - -0.6
207,651 + 0.5
208,100 - 16379 mRNA_8011 0.24 1.0