Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7918

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16350 to 18077 16285 mRNA_7918: 16286 - K15523 FN3KRP protein-ribulosamine 3-kinase, at 18272 to 19315 16286

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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17,331 + 16285 mRNA_7917 0.57 0.2
17,480 - 16285 mRNA_7917 0.65 -0.5
17,684 - 16285 mRNA_7917 0.77 2.0
17,789 - 16285 mRNA_7917 0.83 -0.8
17,900 + 16285 mRNA_7917 0.90 0.3
18,055 + 0.9
18,058 - -0.4
18,219 + 0.2
18,322 - 1.5
18,351 - 1.5
18,358 - -0.4
18,417 - 16286 mRNA_7918 0.14 -0.4
18,480 - 16286 mRNA_7918 0.20 0.4
18,788 - 16286 mRNA_7918 0.49 0.3
18,791 - 16286 mRNA_7918 0.50 0.1
18,915 + 16286 mRNA_7918 0.62 1.3
18,916 - 16286 mRNA_7918 0.62 0.5
19,036 + 16286 mRNA_7918 0.73 -1.4
19,095 + 16286 mRNA_7918 0.79 -1.3
19,100 - 16286 mRNA_7918 0.79 0.0
19,378 - -0.9
19,588 + 0.7
19,654 - 0.1
19,764 - -0.2
19,817 - 0.6
19,831 - -0.5
19,837 + -0.2
19,914 + 2.7
19,934 - -0.2
19,935 + -1.0
20,235 + -1.2
20,291 - 0.3