Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7901

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7901: 16269 - KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation), at 1335118 to 1336063 16269

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,334,120 - 0.7
1,334,130 + 1.2
1,334,177 - -1.2
1,334,177 + 2.0
1,334,181 - -0.2
1,334,198 - -2.4
1,334,199 + 0.2
1,334,210 + 0.8
1,334,213 - -0.3
1,334,215 + -0.5
1,334,223 + 0.7
1,334,228 - -0.4
1,334,242 - -0.6
1,334,247 - -0.7
1,334,250 - 1.9
1,334,254 - 0.6
1,334,255 + 0.0
1,334,256 + 0.0
1,334,269 - 0.6
1,334,301 - -0.3
1,334,315 - 0.1
1,334,319 - 0.1
1,334,320 + 1.5
1,334,325 + 0.8
1,334,335 - 0.5
1,334,336 + -0.1
1,334,481 - -1.8
1,334,481 + -0.3
1,334,487 + 0.5
1,334,595 + 2.6
1,334,747 - 0.6
1,334,914 + 2.0
1,334,915 - 0.2
1,335,334 - 16269 mRNA_7901 0.23 0.5
1,335,743 - 16269 mRNA_7901 0.66 1.1
1,335,811 - 16269 mRNA_7901 0.73 1.0
1,336,063 + -0.2
1,336,377 - 0.1
1,336,592 + -0.3
1,336,639 + 0.0
1,336,641 - 0.0
1,336,730 - 1.5
1,336,849 + -0.1
1,336,890 + -0.3
1,336,914 + -0.7