Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7859

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7858: 16226 - K11673 ACTR8, ARP8, INO80N actin-related protein 8, at 1235988 to 1238958 16226 mRNA_7859: 16227 - Hypothetical Protein, at 1239161 to 1241466 16227 mRNA_7860: 16228 - HMMPfam-Diacylglycerol kinase catalytic domain-PF00781,ProSiteProfiles-DAG-kinase catalytic (DAGKc) domain profile.-PS50146,SUPERFAMILY--SSF111331, at 1241909 to 1243568 16228

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,238,699 + 1.6
1,238,833 + -0.9
1,238,998 + 0.4
1,239,174 - -1.0
1,239,329 - 0.8
1,239,876 - 16227 mRNA_7859 0.31 0.1
1,240,047 - 16227 mRNA_7859 0.38 -0.4
1,240,099 + 16227 mRNA_7859 0.41 0.6
1,240,351 + 16227 mRNA_7859 0.52 -0.8
1,240,542 - 16227 mRNA_7859 0.60 0.4
1,240,743 + 16227 mRNA_7859 0.69 0.7
1,240,910 + 16227 mRNA_7859 0.76 0.2
1,241,092 + 16227 mRNA_7859 0.84 -0.5
1,241,092 - 16227 mRNA_7859 0.84 0.8
1,241,362 - -0.3
1,241,370 - 0.0
1,241,451 + -0.7
1,241,494 - 1.8
1,241,512 - 1.4
1,241,517 + -0.1
1,241,531 + -0.1
1,241,546 - -0.4
1,241,549 + 0.4
1,241,557 + 0.4
1,241,605 - 0.5
1,241,672 - 0.1
1,241,692 - -1.3
1,241,692 + 0.3
1,241,694 - -0.5
1,241,695 + 0.4
1,241,723 - 1.2
1,241,728 + 0.3
1,241,729 - 0.1
1,241,731 - -0.6
1,241,734 - -0.0
1,241,760 - 1.4
1,241,771 + -0.1
1,241,780 - 0.5
1,241,794 + 2.2
1,241,807 + 0.2
1,241,811 + 0.3
1,241,827 - 0.5
1,241,884 - -0.5
1,241,892 - 0.3
1,241,893 + -0.3
1,241,894 + 0.6
1,241,896 + -0.6
1,241,900 - -1.0
1,241,905 + -2.0
1,241,909 - 0.8
1,241,910 - 0.3
1,241,921 - 0.3
1,241,945 + 0.2
1,241,985 - 0.7
1,242,006 - -1.6
1,242,027 - 1.1
1,242,030 + -0.5
1,242,076 - 16228 mRNA_7860 0.10 -0.1
1,242,077 - 16228 mRNA_7860 0.10 0.8
1,242,164 - 16228 mRNA_7860 0.15 -0.3
1,242,166 - 16228 mRNA_7860 0.15 0.4
1,242,174 - 16228 mRNA_7860 0.16 -0.3
1,242,196 + 16228 mRNA_7860 0.17 -0.1
1,242,203 + 16228 mRNA_7860 0.18 -0.4
1,242,206 - 16228 mRNA_7860 0.18 0.1