Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7703

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7702: 16070 - BLAST endoglucanase [Aspergillus fumigatus Af293], at 880758 to 882745 16070 mRNA_7703: 16071 - KOG2996 Rho guanine nucleotide exchange factor VAV3, at 883081 to 887724 16071 mRNA_7704: 16072 - K02214 CDC7 cell division control protein 7, at 888011 to 890440 16072

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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882,144 + 16070 mRNA_7702 0.70 0.2
882,226 + 16070 mRNA_7702 0.74 1.7
882,439 + 16070 mRNA_7702 0.85 -0.2
882,700 + -0.6
882,894 + 0.4
882,992 - 0.4
882,997 - -0.1
883,017 - -1.1
885,485 - 16071 mRNA_7703 0.52 0.8
885,538 + 16071 mRNA_7703 0.53 0.9
885,761 - 16071 mRNA_7703 0.58 2.2
885,937 - 16071 mRNA_7703 0.61 0.5
886,059 + 16071 mRNA_7703 0.64 0.6
886,158 - 16071 mRNA_7703 0.66 -1.0
886,303 - 16071 mRNA_7703 0.69 1.4
886,318 - 16071 mRNA_7703 0.70 0.2
886,319 - 16071 mRNA_7703 0.70 0.3
886,457 - 16071 mRNA_7703 0.73 -0.1
886,463 - 16071 mRNA_7703 0.73 -2.1
886,949 - 16071 mRNA_7703 0.83 -0.5
887,354 - -0.2
887,683 + 0.6
887,696 + 0.0
887,947 - 1.6
887,950 - -0.5
887,957 - 1.3
887,959 + 0.2
887,959 + 0.7